2020

Cramer B, Stöckel D, Kreft M, Wibral M, Schemmel J, Meier K, Priesemann V
Control of criticality and computation in spiking neuromorphic networks with plasticity
Nature Communications Jun 5;11(1):2853. doi: 10.1038/s41467-020-16548-3.

Jean P, Anttonen T, Michanski S, de Diego AMG, Steyer AM, Neef A, Oestreicher D, Kroll J, Nardis C, Pangršič T, Möbius W, Ashmore J, Wichmann C, Moser T
Macromolecular and electrical coupling between inner hair cells in the rodent cochlea
Nature Communications 11:3208. https://doi.org/10.1038/s41467-020-17003-z

Krüppel S, Tetzlaff C
The self-organized learning of noisy environmental stimuli requires distinct phases of plasticity
Network Neuroscience 2020; 4(1) p.174-199. doi: 10.1162/netn_a_00118.

Nestvogel DB, Merino RM, Leon-Pinzon C, Schottdorf M, Lee C, Imig C, Brose N, Rhee JS
The Synaptic Vesicle Priming Protein CAPS-1 Shapes the Adaptation of Sensory Evoked Responses in Mouse Visual Cortex.
Cell Reports Mar 10;30(10):3261-3269.e4. doi: 10.1016/j.celrep.2020.02.045.

Unakafov AM, Schultze T, Gail A, Moeller S, Kagan I, Eule S, Wolf F
Emergence and suppression of cooperation by action visibility in transparent games
PLOS Computational Biology 2020; 16(1): Art. e1007588. doi: 10.1371/journal.pcbi.1007588.

Xu W, Löwel S, Schlüter OM
Silent Synapse-Based Mechanisms of Critical Period Plasticity
Front Cell Neuroscience 2020 Jul 17;14:213. doi: 10.3389/fncel.2020.00213.

Zierenberg J, Wilting J, Priesmann V, Levina A
Description of spreading dynamics by microscopic network models and macroscopic branching processes can differ due to coalescence
Phys Rev E 2020 Feb;101(2-1):022301. doi: 10.1103/PhysRevE.101.022301.

2019

Datseris G, Ziereis A, Albrecht T, Hagmayer Y, Priesemann V, Geisel T
Microtiming Deviations and Swing Feel in Jazz
Scientific Reports 2019; 9(1): Art. 19824. doi: 10.1038/s41598-019-55981-3.

Halawa I, Shirota Y, Neef A, Sommer M, Paulus W
Neuronal tuning: selective targeting of neuronal populations via manipulation of pulse width and directionality
Brain Stimulation 2019 Sep - Oct;12(5):1244-1252. Epub 2019 Apr 30. doi: 10.1016/j.brs.2019.04.012.

Kong D, Lv Z, Häring M, Lin B, Wolf F, Großhans J
In vivo optochemical control of cell contractility at single‐cell resolution
EMBO reports 2019; 20(12): Art. e47755. doi: 10.15252/embr.201947755.

Kühn NK, Gollisch T
Activity Correlations between Direction-Selective Retinal Ganglion Cells Synergistically Enhance Motion Decoding from Complex Visual Scenes
Neuron 2019; 101(5): Art. 976.e7. doi: 10.1016/j.neuron.2019.01.003.

Merino RM, Leon-Pinzon C, Stühmer W, Möck M, Staiger JF, Wolf F, Neef A
Background correlations selectively boost the gamma-sensitivity of cortical GABAergic neurons.
bioRxiv 2019.12.19.882639.

Puelma Touzel M, Wolf F
Statistical mechanics of spike events underlying phase space partitioning and sequence codes in large-scale models of neural circuits.
Physical Review E 2019 May; 99(5-1):052402. doi: 10.1103/PhysRevE.99.052402.

Revah O, Stoler O, Neef A, Wolf F, Fleidervish I, Gutnick MJ
Dynamic gain analysis reveals encoding deficiencies in cortical neurons that recover from hypoxia-induced spreading depolarizations.
Journal of Neuroscience 2019 Sep 25;39(39):7790-7800. Epub 2019 Aug 9. doi: 10.1523/JNEUROSCI.3147-18.2019.

Wilting J, Priesemann V
Between Perfectly Critical and Fully Irregular: A Reverberating Model Captures and Predicts Cortical Spike Propagation.
Cereb Cortex 2019 29(6):2759-2770. doi: 10.1093/cercor/bhz049.

2018

Katz E, Stoler O, Scheller A, Khrapunsky Y, Goebbels S, Kirchhoff F, Gutnick MJ, Wolf F, Fleidervish IA
Role of sodium channel subtype in action potential generation by neocortical pyramidal neurons.
Proceedings of the National Academy of Sciences 2018 Jul 24;115(30):E7184-E7192. doi: 10.1073/pnas.1720493115. Epub 2018 Jul 10.

Keppeler D, Merino RM, Lopez de la Morena D, Bali B, Huet AT, Gehrt A, Wrobel C, Subramanian S, Dombrowski T, Wolf F, Rankovic V, Neef A, Moser T
Ultrafast optogenetic stimulation of the auditory pathway by targeting-optimized Chronos.
EMBO Journal 2018 37: e99649. doi: 10.15252/embj.201899649

Lazarov E, Dannemeyer M, Feulner B, Gutnick M, Wolf F, Neef
An axon initial segment is required for temporal precision in action potential encoding by neuronal populations.
Science Advances 2018 4(11):eaau862. doi: 10.1126/sciadv.aau8621.

Neef J, Ohn TL, Urban NT, Frank T, Jean P, Hell SW, Willig KI, Moser T
Quantitative optical nanophysiology of Ca2+-signaling at inner hair cell active zones.
Nature Commun 2018 9:290. doi:10.1038/s41467-017-02612-y.

Priesemann V, Shriki O
Can a time varying external drive give rise to apparent criticality in neural systems?
PLoS Comput Biol.2018 14(5):e1006081. doi: 10.1371/journal.pcbi.1006081

Sommer M, Ciocca M, Chieffo R, Hammond P, Neef A, Paulus W, Rothwell JC, Hannah R
TMS of primary motor cortex with a biphasic pulse activates two independent sets of excitable neurones.
Brain Stimulation 2018 11(3):558-565. doi: 10.1016/j.brs.2018.01.001.

Wilting J, Dehning J, Pinheiro Neto J, Rudelt L, Wibral M, Zierenberg J, Priesemann V
Operating in a Reverberating Regime Enables Rapid Tuning of Network States to Task Requirements.
Front Syst Neurosci. 2018 12:55. doi: 10.3389/fnsys.2018.00055

Wilting J, Priesemann V
Inferring collective dynamics from widely unobserved system.
Nature Communications 2018 9:2325. doi: 10.1038/s41467-018-04725-4

2017

Faghihi F, Moustafa AA, Heinrich R, Wörgötter F
A computational model of conditioning inspired by Drosophila olfactory system.
Neural Networks 2017, 87:96–108. doi: 10.1016/j.neunet.2016.11.002

Goldschmidt D, Manoonpong P, Dasgupta S
A neurocomputational model of goal-directed navigation in insect-inspired embodied agents.
Front. Neurorobot. 2017, 11:20, doi: 10.3389/fnbot.2017.00020

Helmer M, Schottdorf M, Neef A, Battaglia
Research: Gender bias in scholarly peer review.
eLife 2017, 6 e21718. doi: 10.7554/eLife.21718

Klinglmayr J, Bettstetter C, Timme M, Kirst C
Convergence of Self-Organizing Pulse-Coupled Oscillator Synchronization in Dynamic Networks.
IEEE Trans. Autom. Control. 2017, 66(4)

Kunz P, Antal A, Hewitt M, Neef A, Opitz A & Paulus W
5 kHz Transcranial Alternating Current Stimulation: Lack of Cortical Excitability Changes When Grouped in a Theta Burst Pattern.
Frontiers in Human Neuroscience 2016; 10: 683. doi: 10.3389/fnhum.2016.00683

Levina A, Priesemann V
Subsampling scaling.
Nature Communications 2017, 8:15140. doi: 10.1038/ncomms15140.

Nachstedt T, Tetzlaff C
Working memory requires a combination of transient and attractor-dominated dynamics to process unreliably timed inputs.
Science Reports 2017, 7:2473. doi: 10.1038/s41598-017-02471-z.

Nachstedt T, Tetzlaff C, Manoonpong P
Fast Dynamical Coupling Enhances Frequency Adaptation of Oscillators for Robotic Locomotion Control.
Front. Neurorobot. 2017, 11:14, doi: 10.3389/fnbot.2017.00014

Palmigiano A, Geisel T, Wolf F, Battaglia D
Flexible information routing by transient synchrony.
Nature Neuroscience 2017, 13:4700 doi:10.1038/nn.4569

Picher MM, Gehrt A, Meese S, Ivanovic A, Predoehl F, Jung S, Schrauwen I, Dragonetti AG, Colombo R, Van Camp G, Strenzke N, Moser T
Ca(2+)-binding protein 2 inhibits Ca(2+)-channel inactivation in mouse inner hair cells.
Proc. Natl. Acad. Sci. USA 2017, 114(9):E1717-E1726. doi: 10.1073/pnas.1617533114

Prahlad A, Spalthoff C, Kong D, Großhans J, Göpfert MC, Schmidt CF
Mechanical properties of a Drosophila larval chordotonal organ.
Biophys J 2017, 113(12):2769-2804. doi: 10.1016/j.bpj.2017.08.061

Wollstadt P, Sellers KK, Rudelt L, Priesemann V, Hutt A, Fröhlich F, Wibral M
Breakdown of local information processing may underlie isoflurane anesthesia effects.
PLoS Comput Biol. 2017, Jun 13(6):e1005511. doi: 10.1371/journal.pcbi.1005511

2016

Dann B, Michaels JA, Schaffelhofer S, Scherberger H
Uniting functional network topology and oscillations in the fronto-parietal single unit network of behaving primates.
eLife 2016 Aug 15;5:e15719. doi: 10.7554/eLife.15719.

Denker M, Levina A
Avalanche dynamics.
Stoch. Dyn. 2016 16 (02), 1660005 https://doi.org/10.1142/S0219493716600054

Engelken R, Farkhooi F, Hansel D, van Vreeswijk C, Wolf F
A reanalysis of “Two types of asynchronous activity in networks of excitatory and inhibitory spiking neurons".
F100Res 2016 Aug 22;5:2043. doi: 10.12688/f1000research.9144.1.

Fauth M, Tetzlaff C
Opposing effects of neuronal activity on structural plasticity.
Frontiers in Neuroanatomy 2016 Jun 28;10:75. doi: 10.3389/fnana.2016.00075.

Göpfert MC, Hennig RM
Hearing in Insects.
Annu Rev Entomol 2016; 61:257-76. doi: 10.1146/annurev-ento-010715-023631.

Gupta VK, Pech U, Bhukel A, Fulterer A, Ender A, Mauermann SF, Andlauer Till FM, Antwi-Adjei E, Beuschel C, Thriene K, Maglione M, Quentin C, Bushow R, Schwärzel M, Mielke, T, Madeo F, Dengjel J, Fiala A, Sigrist SJ
Spermidine Suppresses Age-Associated Memory Impairment by Preventing Adverse Increase of Presynaptic Active Zone Size and Release.
PLOS Biol 2016 Sep 29;14(9):e1002563. doi: 10.1371/journal.pbio.1002563.

Helmer M, Kozyrev V, Stephan V, Treue S, Geisel T, Battaglia D
Model-Free Estimation of Tuning Curves and Their Attentional Modulation, Based on Sparse and Noisy Data.
PLoS ONE 2016 Jan 19;11(1):e0146500. doi: 10.1371/journal.pone.0146500.

Kirst C, Timme M, Battaglia D
Dynamic information routing in complex networks.
Nat Commun 7, 2016 Apr 12;7:11061. doi:10.1038/ncomms11061

Kuang S, Morel P, Gail A
Planning movements in visual and physical space in monkey posterior parietal cortex.
Cerebral Cortex 2016 Feb; 26(2):731-47. doi: 10.1093/cercor/bhu312.

Lajoie G, Thivierge JP, Shea-Brown E
Encoding in Balanced Networks: Revisiting Spike Patterns and Chaos in Stimulus-Driven Systems.
PLoS Comput Biol. 2016 Dec 14;12(12):e1005258. doi: 10.1371/journal.pcbi.1005258.

Li Y, Kulvicius T, Tetzlaff C
Induction and consolidation of calcium-based homo- and heterosynaptic potentiation and depression.
PLoS One, 2016 Aug 25;11(8):e0161679. doi: 10.1371/journal.pone.0161679.

Manoonpong P, Petersen D, Kovalev A, Gorb, SN, Spinner M, Heepe L
Enhanced Locomotion Efficiency of a Bio-inspired Walking Robot using Contact Surfaces with Frictional Anisotropy.
Scientific Reports 2016 Dec 23;6:39455. doi: 10.1038/srep39455.

Ohn TL, Rutherford MA, Jing Z, Jung S, Duque-Afonso CJ, Hoch G, Picher MM, Scharinger A, Strenzke N, Moser T
Hair cells use active zones with different voltage dependence of Ca2+ influx to decompose sounds into complementary neural codes.
Proc. Natl. Acad. Sci. USA 2016 Aug 9;113(32):E4716-25. doi: 10.1073/pnas.1605737113.

Samhaber R, Schottdorf M, El Hady A, Bröking K, Daus A, Thielemann C, Stühmer W, Wolf F Growing neuronal islands on multi-electrode arrays using an accurate positioning-mu CP device.
Journal of Neuroscience Methods 2016 Jan 15;257:194-203. doi: 10.1016/j.jneumeth.2015.09.022.

Schaffelhofer S, Scherberger H
Object vision to hand action in macaque parietal, premotor, and motor cortices.
eLife 2016 Jul 26;5:e15278. doi: 10.7554/eLife.15278.

Vincent-Lamarre P, Lajoie G, Thivierge JP
Driving reservoir models with oscillations: a solution to the extreme structural sensitivity of chaotic networks.
J Comput Neurosci. 2016 Dec;41(3):305-322. doi: 10.1007/s10827-016-0619-3.

Yao T, Treue S, Krishna BS
An Attention-Sensitive Memory Trace in Macaque MT Following Saccadic Eye Movements.
PLoS Biol 2016 Feb 22;14(2):e1002390. doi: 10.1371/journal.pbio.1002390.

2015

Arnoldt H, Chang S, Jahnke S, Umersbach B, Taschenberger H, Timme M
When Less Is More: Non-monotonic Spike Sequence Processing in Neurons.
PLoS Computational Biology 2015 1(2). doi:10.1371/journal.pcbi.1004002.

Aru J, Aru J, Priesemann V, Wibral M, Lana L, Pipa G, Singer W, Vicente R
Untangling cross-frequency coupling in neuroscience.
Curr Opin Neurobiol 2015 31:51–61 doi: 10.1016/j.conb.2014.08.002

Bao G, de Jong D, Alevra M, Schild D
Ca2+/BK channel clusters in olfactory receptor neurons and their role in odor coding.
Eur J Neurosci 2015 42(11), 2985-2995. doi: 10.1111/ejn.13095.

Casadiego J, Timme M
Network Dynamics as an Inverse Problem,
In: Mathematical Technology of Networks 2015 ed.: Delio Mugnolo. chapter 3, pages 39-48. Springer, Basel. doi: 10.1007/978-3-319-16619-3_4.

Chatterjee S, Nachstedt T, Tamosiunaite M, Wörgötter F, Enomoto Y, Ariizumi R, Matsuno F, Manoonpong P
Learning and Chaining of Motor Primitives for Goal-directed Locomotion of a Snake-Like Robot with Screw-Drive Units.
International Journal of Advanced Robotic Systems 2015 12:176. doi: 10.5772/61621

Dasgupta S, Goldschmidt D, Wörgötter F, Manoonpong P
Distributed Recurrent Neural Forward Models with Neural Control for Complex Locomotion in Walking Robots.
Front. Neurorobot. 2015 9:10. doi: 10.3389/fnbot.2015.00010.

Effenberger F, Jost J, Levina A
Self-organization in Balanced State Networks by STDP and Homeostatic Plasticity.
PLoS Computational Biology 2015 11(9):e1004420. doi: 10.1371/journal.pcbi.1004420.

Fauth M, Wörgötter F, Tetzlaff C
Formation and Maintenance of Robust Long-Term Information Storage in the Presence of Synaptic Turnover.
PLoS Computational Biology 2015 11(12):e1004684. doi: 10.1371/journal.pcbi.1004684 .

Grinke E, Tetzlaff C, Wörgötter F, Manoonpong P
Synaptic plasticity in a recurrent neural network for versatile and adaptive behaviors of a walking robot.
Front. Neurorobot. 2015 9:11. doi: 10.3389/fnbot.2015.00011.

Hansen ECA, Battaglia D, Spiegler A, Deco G, Jirsa VK
Functional connectivity dynamics: Modeling the switching behavior of the resting state.
NeuroImage 2015 105:525–535. doi: 10.1016/j.neuroimage.2014.11.001.

Helmer M, Chen XJ, Wei W, Wolf F, Battaglia D
Connectome of a model local cortical circuit flexibly shapes layer-dependent multi-frequency oscillations.
bioRxiv. 2015. doi: https://doi.org/10.1101/026674.

Jahnke S, Timme M, Memmesheimer R-M
A Unified Dynamic Model for Learning, Replay, and Sharp-Wave/Ripples.
Journal of Neuroscience 2015 35: 16236–16258. doi: 10.1523/JNEUROSCI.3977-14.2015 .

Janssen P, Scherberger H
Visual Guidance in Control of Grasping.
Annual Review of Neuroscience 2015 38:69–86. doi: 10.1146/annurev-neuro-071714-034028 .

Jung S, Maritzen T, Wichmann C, Jing Z, Neef A, Revelo NH, Al-Moyed H, Meese S, Wojcik SM, Panou I, Bulut H, Schu P, Ficner R, Reisinger E, Rizzoli SO, Neef J, Strenzke N, Haucke V, Moser T
Disruption of adaptor protein 2μ (AP‐2μ) in cochlear hair cells impairs vesicle reloading of synaptic release sites and hearing.
The EMBO Journal 34 2686–2702. doi: 10.15252/embj.201591885.

Karak S et al.
Diverse Roles of Axonemal Dyneins in Drosophila Auditory Neuron Function and Mechanical Amplification in Hearing.
Scientific Reports 2015 5:17085. doi: 10.1038/srep17085.

Kludt E, Okom C, Brinkmann A, Schild D
Integrating Temperature with Odor Processing in the Olfactory Bulb.
Journal of Neuroscience 2015 35(20):7892–7902. doi: 10.1523/JNEUROSCI.0571-15.2015.

Kuang S, Morel P, Gail A
Planning Movements in Visual and Physical Space in Monkey Posterior Parietal Cortex.
Cereb Cortex 2015 26(2):731–747. doi: 10.1093/cercor/bhu312.

Martinelli E, Polese D, Magna G, Vergara A, Schild D, DiNatale C
Stable odor recognition by a neuro-adaptive electronic nose.
Scientific Reports 2015 5, 10960. doi: 10.1038/srep10960.

Neef NE, Hoang TNL, Neef A, Paulus W, Sommer M
Speech dynamics are coded in the left motor cortex in fluent speakers but not in adults who stutter.
Brain 2015 138 712–725. doi: 10.1093/brain/awu390.

Pangrsic T, Gabrielaitis M, Michanski S, Schwaller B, Wolf F, Strenzke N, Moser T
EF-hand protein Ca2+ buffers regulate Ca2+ influx and exocytosis in sensory hair cells.
Proc Natl Acad Sci USA 2015 112(9):E1028–E1037. doi: 10.1073/pnas.1416424112.

Pech U, Revelo NH, Seitz KJ, Rizzoli SO, Fiala A
Optical Dissection of Experience- Dependent Pre- and Postsynaptic Plasticity in the Drosophila Brain.
Cell Reports 2015 10(12):2083– 2095. doi: 10.1016/j.celrep.2015.02.065.

Price T, Wadewitz P, Cheney D, Seyfarth R, Hammerschmidt K, Fischer J
Vervets revisited: A quantitative analysis of alarm call structure and context specificity.
Scientific Reports 2015 5:13220. doi: 10.1038/srep13220.

Ren G, Chen W, Dasgupta S, Kolodziejski C, Wörgötter F, Manoonpong P
Multiple Chaotic Central Pattern Generators with Learning for Legged Locomotion and Malfunction Compensation.
Information Sciences 2015 294, 666-682. doi: 10.1016/j.ins.2014.05.001.

Schaffelhofer S, Agudelo-Toro A, Scherberger H
Decoding a Wide Range of Hand Configurations from Macaque Motor, Premotor, and Parietal Cortices.
Journal of Neuroscience 2015 35(3):1068–1081. doi: 10.1523/JNEUROSCI.3594-14.2015.

Schottdorf M, Keil W, Coppola D, White LE, Wolf F
Random Wiring, Ganglion Cell Mosaics, and the Functional Architecture of the Visual Cortex. PLoS Computational Biology 2015 11(11). doi:10.1371/journal.pcbi.1004602.

Stern S, Agudelo-Toro A, Rotem A, Moses E & Neef A
Chronaxie Measurements in Patterned Neuronal Cultures from Rat Hippocampus.
PLoS ONE 2015 10 e0132577. doi: 10.1371/journal.pone.0132577.

Tetzlaff C, Dasgupta S, Kulvicius T, Wörgötter F
The Use of Hebbian Cell Assemblies for Nonlinear Computation.
Scientific Reports 2015 5:12866. doi: 10.1038/srep12866.

Touzel MP, Wolf F
Complete Firing-Rate Response of Neurons with Complex Intrinsic Dynamics.
PLoS Computational Biology 2015 11(12):e1004636. doi: 10.1371/journal.pcbi.1004636.

Wadewitz P, Hammerschmidt K, Battaglia D, Witt A, Wolf F, Fischer J
Characterizing Vocal Repertoires-Hard vs. Soft Classification Approaches.
PLoS ONE 2015 10(4):e0125785. doi: 10.1371/journal.pone.0125785.

Wei W, Wolf F, Wang X-J
Impact of membrane bistability on dynamical response of neuronal populations.
Phys Rev E 92(3):032726. doi: 10.1103/PhysRevE.92.032726.

Westendorff S, Kuang S, Taghizadeh B, Donchin O, Gail A
Asymmetric generalization in adaptation to target displacement errors.
J Neurophysiol 2015 doi: 10.1152/jn.00483.2014. doi: 10.1152/jn.00483.2014.

Wibral M, Lizier JT, Priesemann V
Bits from brains for biologically inspired computing.
Front. Robotics 2015 AI Mar, 19, doi: 10.3389/frobt.205.00005.

Xiong X, Wörgötter F, Manoonpong P
Adaptive and Energy Efficient Walking in a Hexapod Robot under Neuromechanical Control and Sensorimotor Learning.
IEEE Transactions on Cybernetics 2015 99, doi: 10.1109/TCYB.2015.2479237.

Yang Y, Adowski TR, Ramamurthy B, Neef A, Xu-Friedman MA
High speed dynamic clamp interface.
Journal of Neurophysiology 113 3634–45. doi: 10.1152/jn.00543.2014.

2014

Andlauer TF, Scholz-Kornehl S, Tian R, Kirchner M, Babikir HA, Depner H, Loll B, Quentin C, Gupta VK, Holt MG, Dipt S, Cressy M, Wahl MC, Fiala A, Selbach M, Schwärzel M, Sigrist SJ.
Drep-2 is a novel synaptic protein important for learning and memory.
eLife 2014 3, doi:10.7554/eLife.03895

Barth J, Dipt S, Pech U, Hermann M, Riemensperger T, Fiala A
Differential Associative Training Enhances Olfactory Acuity in Drosophila melanogaster.
Journal of Neuroscience 2014 34(5):1819–1837

Bick C, Kolodziejski C, Timme M
Controlling chaos faster.
Chaos 2014 24:033138

Breuer D, Timme M, Memmesheimer R-M
Statistical Physics of Neural Systems with Nonadditive Dendritic Coupling.
Phys Rev X 2014 4(1):011053

Chakrabarti S, Martinez-Vazquez P, Gail A
Synchronization patterns suggest different functional organization in parietal reach region and dorsal premotor cortex.
J Neurophysiol. 2014 Dec 15;112(12):3138-53.

Chapochnikov NM, Takago H, Huang CH, Pangršič T, Khimich D, Neef J, Auge E, Göttfert F, Hell SW, Wichmann C, Wolf F, Moser T.
Uniquantal Release through a Dynamic Fusion Pore Is a Candidate Mechanism of Hair Cell Exocytosis.
Neuron 2014 83(6):1389–1403

Dasgupta S,Wörgötter F, Manoonpong P
Neuromodulatory Adaptive Combination of Correlation-based Learning in Cerebellum and Reward-based Learning in Basal Ganglia for Goal-directed Behavior Control.
Front. Neural Circuits 2014 8: 00126, DOI: 10.3389/fncir.2014.00126

Dipt S, Riemensperger T, Fiala A
Optical calcium imaging using DNA-encoded fluorescence sensors in transgenic fruit flies, Drosophila melanogaster.
Methods Mol Biol 2014 1071:195-206

Geissbuehler S, Sharipov A, Godinat A, Bocchio NL, Sandoz PA, Huss A, Jensen NA, Jakobs S, Enderlein J, Gisou van der Goot F, Dubikovskaya EA, Lasser T, Leutenegger M.
Live-cell multiplane three-dimensional super-resolution optical fluctuation imaging.
Nature Communications 2014 5:5830

Geurten BR, Jähde P, Corthals K, Göpfert MC
Saccadic body turns in walking Drosophila.
Front Behav Neurosci. 2014 8, 365

Goldschmidt D, Wörgötter F, Manoonpong P
Biologically-Inspired Adaptive Obstacle Negotiation Behavior of Hexapod Robots.
Front. Neurorobot. 2014 8:3. DOI: 10.3389/fnbot.2014.00003

Jahnke S, Memmesheimer R-M, Timme M
Oscillation-Induced Signal Transmission and Gating in Neural Circuits.
PLoS Computational Biology 2014 10(12):e1003940

Jahnke S, Memmesheimer R-M, Timme M
Hub-activated signal transmission in complex networks.
Phys. Rev. E. 2014 89:030701

Kuang S, Gail A
When adaptive control fails: Slow recovery of reduced rapid online control during reaching under reversed vision.
Vision Res, 2014 doi 10.1016/j.visres.2014.08.021

Lajoie G, Thivierge JP, Shea-Brown E
Structured chaos shapes spike-response noise entropy in balanced neural networks.
Front Comput Neurosci 2014 8(123):1-10

Levina A, Herrmann JM
The Abelian distribution.
Stoch. Dyn. 2014 14 (03), 1450001

Manoonpong P, Wörgötter F, Laksanacharoen P
Biologically Inspired Modular Neural Control for a Leg-Wheel Hybrid Robot.
Advances in Robotics Research (ARR). Techno Press 2014 Vol. 1, No. 1, 101-126, DOI: http://dx.doi.org/10.12989/arr.2014.1.1.101

Mendoza Schulz A, Jing Z, Sánchez Caro JM, Wetzel F, Dresbach T, Strenzke N, Wichmann C, Moser T
Bassoon-disruption slows vesicle replenishment and induces homeostatic plasticity at a CNS synapse.
EMBO J 2014 33:512-27.

Orlandi JG, Stetter O, Soriano J, Geisel T, Battaglia D
Transfer entropy reconstruction and labeling of neuronal connections from simulated calcium imaging.
PLoS ONE 2014 9: e98842.

Priesemann V, Wibral M, Valderrama M, Pröpper R, Le Van Quyen M, Geisel T, Triesch J, Nikolic D, Munk MH
Spike avalanches in vivo suggest a driven, slightly subcritical brain state.
Front. Sci. Neurosci. 2014 Jun 24;8:108. doi: 10.3389/fnsys.2014.00108.

Rotem A, Neef A, Neef NE, Agudelo-Toro A, Rakhmilevitch D, Paulus W & Moses E
Solving the Orientation Specific Constraints in Transcranial Magnetic Stimulation by Rotating Fields.
PLoS ONE 2014 9 e86794

Schottdorf M, Eglen SJ, Wolf F, Keil W
Can Retinal Ganglion Cell Dipoles Seed Iso- Orientation Domains in the Visual Cortex?
PLoS ONE 2014 9(1):e86139

Soulavie F, Piepenbrock D, Thomas J, Vieillard J, Duteyrat JL, Cortier E, Laurençon A, Göpfert MC, Durand B.
hemingway is required for sperm flagella assembly and ciliary motility in Drosophila.
Mol Biol Cell 2014 25(8):1276–1286

Taghizadeh B, Gail A
Spatial task context makes short-latency reaches prone to induced Roelofs illusion.
Front Hum Neurosci 2014 8(673), doi:10.3389/fnhum.2014.00673

Timme M, Casadiego J
Revealing networks from dynamics: an introduction.
J. Phys. A-Math. Theor. 2014 47: 343001.

Vasmer D, Pooryasin A, Riemensperger T, Fiala A
Induction of aversive learning through thermogenetic activation of Kenyon cell ensembles in Drosophila.
Front Behav Neurosci 2014 8:174

Wolf F, Engelken R, Puelma-Touzel M, Weidinger JDF, Neef A
Dynamical models of cortical circuits.
Curr Opin Neurobiol 2014 25:228–236

Wong AB, Rutherford MA, Gabrielaitis M, Pangršič T, Göttfert F, Frank T, Michanski S, Hell S, Wolf F, Wichmann C, Moser T
Developmental refinement of hair cell synapses tightens the coupling of Ca2+ influx to exocytosis.
EMBO J 2014 33:247-64.

Xiong X, Wörgötter F, Manoonpong P
Neuromechanical Control for Hexapedal Robot Walking on Challenging Surfaces and Surface Classification.
Robotics and Autonomous Systems 2014 doi: 10.1016/j.robot.2014.07.008

Xiong X, Wörgötter F, Manoonpong P
Virtual Agonist-antagonist Mechanisms Produce Biological Muscle-like Functions: An Application for Robot Joint Control.
Industrial Robot: An International Journal 2014 41 (4)

2013

Agudelo-Toro A, Neef A
Computationally efficient simulation of electrical activity at cell membranes interacting with self-generated and externally imposed electric fields
J Neural Eng. 2013 10(2):026019

Battaglia D, Karagiannis A, Gallopin T, Gutch H, Cauli B
Beyond the frontiers of neuronal types.
Frontiers in Neural Circuits 2013 7, 13

Bick, C., Kolodziejski C, Timme M
Stalling chaos control accelerates convergence.
New J. Phys. 2013 15: 063038.

Biess A
Shaping of arm configuration space by prescription of non-Euclidean metrics with applications to human motor control.
Phys Rev E, 2013 87: 012729

Dasgupta S, Wörgötter F, Manoonpong P
Information Dynamics based Self-Adaptive Reservoir for Delay Temporal Memory Tasks.Evolving Systems 2013 4(4): 235-249, doi: 10.1007/s12530-013-9080-y

El Hady A, Afshar G, Bröking K, Schlüter OM, Geisel T, Stühmer W, Wolf F
Optogenetic stimulation effectively enhances intrinsically generated network synchrony.
Front Neural Circuits 2013 7:1-15

Faghihi F, Kolodziejski C, Fiala A, Wörgötter F, Tetzlaff C
An information theoretic model of information processing in the Drosophila olfactory system: the role of inhibitory neurons for system efficiency.
Frontiers in Computational Neuroscience 2013 7:183. doi:10.3389/fncom.2013.00183

Gupta VK, Scheunemann L, Eisenberg T, Mertel S, Bhukel A, Koemans TS, Kramer JM, Liu KS, Schroeder S, Stunnenberg HG, Sinner F, Magnes C, Pieber TR, Dipt S, Fiala A, Schenck A, Schwaerzel M, Madeo F, Sigrist SJ
Restoring polyamines protects from age-induced memory impairment in an autophagy-dependent manner.
Nature Neuroscience 2013 16(10):1453–1460

Ilin V, Malyshev A, Wolf F, Volgushev M
Fast Computations in Cortical Ensembles Require Rapid Initiation of Action Potentials.
Journal of Neuroscience 2013 33(6): 2281-2292

Jahnke, S., Memmesheimer R-M, Timme M
Propagating synchrony in feed-forward networks.
Front. Comput. Neurosci. 2013 7: 1–25.

Jing Z, Rutherford MA, Takago H, Frank T, Fejtova A, Khimich D, Moser T, Strenzke N Disruption of the Presynaptic Cytomatrix Protein Bassoon Degrades Ribbon Anchorage, Multiquantal Release, and Sound Encoding at the Hair Cell Afferent Synapse.
Journal of Neuroscience 2013 33(10):4456–4467

Kulvicius T, Biehl M, Aein MJ, Tamosiunaite M, Wörgötter F
Interaction learning for dynamic movement primitives used in cooperative robotic tasks.
Robotics and Autonomous Systems 2013 61(12), 1450–1459

Manoonpong P, Kolodziejski C, Wörgötter F, Morimoto J
Combining Correlation-Based and Reward-Based Learning in Neural Control for Policy Improvement.
Advances in Complex Systems 2013 May 16(02n03) DOI: 10.1142/S021952591350015X

Manoonpong P, Parlitz U, Wörgötter F
Neural Control and Adaptive Neural Forward Models for Insect-like, Energy-Efficient, and Adaptable Locomotion of Walking Machines.
Front. Neural Circuits 2013 7: 12. doi: 10.3389/fncir.2013.00012

Neef A, El Hady A, Nagpal J, Bröking K, Afshar G, Schlüter OM, Geisel T, Bamberg E, Fleischmann R, Stühmer W, Wolf F
Continuous Dynamic Photostimulation - inducing in-vivo-like fluctuating conductances with Channelrhodopsins.
arXiv q-bio.NC 2013

Pech U, Revelo NH, Seitz KJ, Rizzoli SO, Fiala A
Optical dissection of experience- dependent pre- and postsynaptic plasticity in the Drosophila brain.
Cell Rep 2013 10(12):2083-95

Pech U, Dipt S, Barth J, Singh P, Jauch M, Thum AS, Fiala A, Riemensperger T
Mushroom body miscellanea: transgenic Drosophila strains expressing anatomical and physiological sensor proteins in Kenyon cells.
Front Neural Circuits 2013 7:147

Pech U, Pooryasin A, Birman S, Fiala A
Localization of the contacts between Kenyon cells and aminergic neurons in the Drosophila melanogaster brain using SplitGFP reconstitution.
J Comp Neurol 2013 521(17):3992-4026

Riemensperger T, Issa AR, Pech U, Coulom H, Nguyen MAV, Cassar M, Jacquet M, Fiala A, Birman S
A Single Dopamine Pathway Underlies Progressive Locomotor Deficits in a Drosophila Model of Parkinson Disease.
Cell Reports 2013 5(4):952–960

Tetzlaff C, Kolodziejski C, Timme M, Tsodyks M, Woergoetter F
Synaptic Scaling Enables Dynamically Distinct Short- and Long-Term Memory Formation.
PLoS Computational Biology 2013 9(10):e1003307

Uhlig M, Levina A, Geisel T, Herrmann JM
Critical dynamics in associative memory networks.
Front. Comp. Neuro. 2013 Jul 24; 7:87. doi: 10.3389/fncom.2013.00087.

Witt A, Palmigiano A, Neef A, Hady El A, Wolf F, Battaglia D
Controlling the oscillation phase through precisely timed closed-loop optogenetic stimulation: a computational study.
Front Neural Circuits 2013 7: 49.

Wong AB, Jing Z, Rutherford MA, Frank T, Strenzke N, Moser T
Concurrent maturation of inner hair cell synaptic Ca2+ influx and auditory nerve spontaneous activity around hearing onset in mice.
Journal of Neuroscience 2013 33(26):10661-6.

2012

Wong AB, Jing Z, Rutherford MA, Frank T, Strenzke N, Moser T
Concurrent Maturation of Inner Hair Cell Synaptic Ca2+ Influx and Auditory Nerve Spontaneous Activity around Hearing Onset in Mice.
Journal of Neuroscience 2012 33(26):10661–10666

Battaglia D, Witt A, Wolf F Geisel T
Dynamic effective connectivity of inter-areal brain circuits.
PLoS Computational Biology 2012 8, e1002438

Baptista MS, Rubinger RM, Viana ER, Sartorelli JC, Parlitz U, Grebogi C
Mutual Information Rate and Bounds for It.
PLoS ONE 2012 7(10):e46745, doi: 10.1371/journal.pone.0046745

Bick C, Timme M, Kolodziejski C
Adapting Predictive Feedback Chaos Control for Optimal Convergence Speed.
SIAM J. Appl. Dyn. Syst. 2012 11: 1310–1324.

Chakrabarti S, Hebert P, Wolf MT, Campos M, Burdick JW, Gail A
Expert-like performance of an autonomous spike tracking algorithm in isolating and maintaining single units in the macaque cortex.
Journal of Neuroscience Methods 2012 205:72-85

Dieck ST, Specht D, Strenzke N, Hida Y, Krishnamoorthy V, Schmidt KF, Inoue E, Ishizaki H, Tanaka-Okamoto M, Miyoshi J, Hagiwara A, Brandstätter JH, Löwel S, Gollisch T, Ohtsuka T, Moser T
Deletion of the Presynaptic Scaffold CAST Reduces Active Zone Size in Rod Photoreceptors and Impairs Visual Processing.
Journal of Neuroscience 2012 32(35):12192– 12203

Effertz T, Nadrowski B, Piepenbrock D, Albert J T, Göpfert MC
Direct gating and mechanical integrity of Drosophila auditory transducers require TRPN1.
Nature Neuroscience 2012 15(9), 1198–1200

Grabow C, Grosskinsky S, Timme M
Small-World Network Spectra in Mean-Field Theory.
Physical Review Letters 2012 108(21), 218701. doi:10.1103/PhysRevLett.108.218701

Hass J, Blaschke S, Herrmann JM
Cross-Modal Distortion of Time Perception: Demerging the Effects of Observed and Performed Motion.
PLoS ONE 2012 7(6):e38092

Huang M, Volgushev M, Wolf F.
A small fraction of strongly cooperative sodium channels boosts neuronal encoding of high frequencies.
PLoS ONE 2012 7(5): e37629

Jahnke S, Timme M, Memmesheimer RM
Guiding Synchrony through Random Networks.
Physical Review X 2012 2(4):041016

Keil W, Kaschube M, Schnabel M, Kisvarday Z F, Löwel S, Coppola D M, White L E, Wolf F
Comment on “Universality in the Evolution of Orientation Columns in the Visual Cortex.”
(Response) Science 2012 336(6080), 413–413. doi:10.1126/science.1206416

Klaes C, Schneegans S, Schöner G, Gail A
Sensorimotor learning biases choice behaviour: a learning neural field model for decision making.
PLoS Computational Biology 2012 8: e1002774

Kriener B, Anand L, Timme M
Complex networks: when random walk dynamics equals synchronization.
New J. Phys.2012 14: 093002.

Laczo B, Antal A, Niebergall R, Treue S, Paulus W
Transcranial alternating stimulation in a high gamma frequency range applied over V1 improves contrast perception but does not modulate spatial attention.
Brain Stimul 2012 5(4):484–491

Memmesheimer R-M, Timme M
Non-Additive Coupling Enables Propagation of Synchronous Spiking Activity in Purely Random Networks.
PLoS Computational Biology 2012 8(4), e1002384

Monteforte M, Wolf F
Dynamic flux tubes form reservoirs of stability in neuronal circuits.
Physical Review X. 2012 2(4):041007

Neves FS, Timme M
Computation by Switching in Complex Networks of States.
Physical Review Letters 2012 109(1), 018701

Newton FG, zur Lage PI, Karak S, Moore DJ, Göpfert MC, Jarman AP
Forkhead transcription factor Fd3F cooperates with Rfx to regulate a gene expression program for mechanosensory cilia specialization.
Developmental Cell. 2012 22, 1221-33

Reichl L, Heide D, Löwel S, Crowley JC, Kaschube M, Wolf F
Coordinated optimization of visual cortical maps (I) Symmetry-based analysis.
PLoS Computational Biology 2012 8(11): e1002466

Reichl L, Heide D, Löwel S, Crowley JC, Kaschube M, Wolf F
Coordinated optimization of visual cortical maps (II) Numerical studies.
PLoS Computational Biology 2012 8(11): e1002756

Riemensperger T, Pech U, Dipt S, Fiala A.
Optical calcium imaging in the nervous system of Drosophila melanogaster.
Biochimica et Biophysica Acta 2012 20(8):1169-78

Rutherford MA, Chapochnikov NM, Moser T
Spike Encoding of Neurotransmitter Release Timing by Spiral Ganglion Neurons of the Cochlea.
Journal of Neuroscience 2012 32(14):4773–4789

Schrauwen I, Helfmann S, Inagaki A, Predoehl F, Tabatabiefar MA, Pichter MM, Sommen, M, Seco SZ, Oostrik J, Kremer H, Dheedene A, Claes C, Fransen E, Chaleshtori MH, Coucke P, Lee A, Moser T, Van Camp G
A Mutation in CABP2, Expressed in Cochlear Hair Cells, Causes Autosomal-Recessive Hearing Impairment.
American Journal of Human Genetics 2012 91, 636-45

Schrobsdorff H, Ihrke M, Behrendt J, Herrmann JM, Hasselhorn M
Identity Negative Priming: A Phenomenon of Perception, Recognition or Selection?
PLoS ONE 2012 7(3):e32946

Senthilan P R, Piepenbrock D, Ovezmyradov G, Nadrowski B, Bechstedt S, Pauls S, Winkler M
Drosophila Auditory Organ Genes and Genetic Hearing Defects.
Cell 2012 150(5), 1042–1054

Stetter O, Battaglia D, Soriano J, Geisel T
Model-free reconstruction of excitatory neuronal connectivity from calcium imaging signals.
PLoS Computational Biology 2012 8(8), e1002653

Tetzlaff C, Kolodziejski C, Timme M, Wörgötter F
Analysis of synaptic scaling in combination with Hebbian plasticity in several simple networks.
Frontiers in Computational Neuroscience 2012 6:36, doi:10.3389/fncom.2012.00036.

Witthaut D, Timme M
Braess’s paradox in oscillator networks, desynchronization and power outage.
New J. Phys. 2012 14: 083036.

2011

Battaglia D, Hansel D
Synchronous chaos and broad band gamma rhythm in a minimal multi-layer model of primary visual cortex.
PLoS Computational Biology 2011 7, e1002176

Bick C, Timme M, Paulikat D, Rathlef D, Ashwin P
Chaos in Symmetric Phase Oscillator Networks.
Physical Review Letter 2011 107:244101

Biess A, Flash T, Liebermann DG
Riemannian geometric approach to human arm dynamics, movement optimization and invariance.
Phys Rev E 2011 83:031927

Biess A, Korkotian E, Holcman D
Barriers to diffusion in dendrites and estimation of calcium spread following synaptic input.
PLoS Computional Biology 2011 7(10): e1002182.

Effertz T, Wiek R, Göpfert MC
NompC TRP channel is essential for Drosophila sound receptor function.
Current biology 2011 21(7), 592–597

Eifler J, Martinelli E, Santonico M, Capuano R, Schild D, Di Natale C
Differential detection of potentially hazardous Fusarium species in wheat grains by an electronic nose.
PLoS ONE 2011 6(6), e21026

Gorur Shandilya S, Timme M
Inferring network topology from complex dynamics.
New J. Phys. 2011 13:013004.

Grabow C, Grosskinsky S, Timme M
Speed of Complex Network Synchronization.
Eur. Phys. J. 2011 B 84:613.

Gregory FD, Bryan KE, Pangršič T, Calin-Jageman IE, Moser T, Lee A
Harmonin inhibits presynaptic Ca(v)1.3 Ca(2+) channels in mouse inner hair cells.
Nature Neuroscience 2011 14:1109-11

Greifzu F, Schmidt S, Schmidt K-F, Kreikemeier K, Witte OW, Löwel S
Global impairment and therapeutic restoration of visual plasticity mechanisms after a localized cortical stroke.
Proc Natl Acad Sci U S A 2011 108(37), 15450–15455

Hennig H, Fleischmann R, Fredebohm A, Hagmayer Y, Nagler J, Witt A, Theis FJ
The Nature and Perception of Fluctuations in Human Musical Rhythms.
PLoS ONE 2011 6(10), e26457

Hoon M, Soykan T, Falkenburger B, Hammer M, Patrizi A, Schmidt K-F, Sassoè-Pognetto M, Löwel S, Moser T
Neuroligin-4 is localized to glycinergic postsynapses and regulates inhibition in the retina.
Proc Natl Acad Sci U S A 2011 108(7), 3053–3058

Kaschube M, Coppola DM, Schnabel M, Löwel S, White LE, Wolf F
An Alternative Hypothesis for Orientation Columns in the Visual Cortex (Reply).
Science 2011 doi: 10.1126/science.1194869

Kielblock H, Kirst C, Timme M
Breakdown of order preservation in symmetric oscillator networks with pulse-coupling
Chaos 2011 21:025113.

Klaes C, Westendorff S, Chakrabarti S, Gail A
Choosing goals, not rules: deciding among rule based action plans.
Neuron 2011 70, 536–548

Nagler J, Levina A, Timme M
Impact of single links in competitive percolation.
Nature Physics 2011 7:265

Niebergall R, Khayat PS, Treue S, Martinez-Trujillo JC
Multifocal attention filters out distracter stimuli within and beyond receptive field boundaries of primate MT neurons.
Neuron 2011 72:1067-1079

Niebergall R, Khayat PS, Treue S, Martinez-Trujillo JC
Expansion of MT Neurons Excitatory Receptive Fields during Covert Attentive Tracking.
Journal of Neuroscience 2011 31(43):15499–15510

Niewalda T, Völler T, Eschbach C, Ehmer J, Chou WC, Timme M, Fiala A, Gerber B.
A combined perceptual, physico-chemical, and imaging approach to 'odour-distances' suggests a categorizing function of the Drosophila antennal lobe.
PLoS ONE 2011 6(9):e24300

Reisinger E, Bresee C, Neef J, Nair R, Reuter K, Bulankina A, Nouvian R, Koch M, Bückers J, Kastrup L, Roux I, Petit C, Hell SW, Brose N, Rhee JS, Kügler S, Brigande JV, Moser T
Probing the functional equivalence of otoferlin and synaptotagmin 1 in exocytosis.
Journal of Neuroscience 2011 30; 31: 4886-95

Tchumatchenko T, Malyshev A, Wolf F, Volgushev M
Ultrafast Population Encoding by Cortical Neurons.
Journal of Neuroscience 2011 31(34):12171–12179

Tchumatchenko T, Wolf F
Representation of dynamical stimuli in populations of threshold neurons.
PLoS Computational Biology 2011 7(10), e1002239

Tetzlaff C, Kolodziejnski C, Timme M, Wörgötter F
Synaptic scaling in combination with many generic plasticity mechanisms stabilizes circuit connectivity.
Frontiers in Computational Neuroscience 2011 5:47. doi:10.3389/fncom.2011.00047

Van Bussel F, Kriener B, Timme M
Inferring synaptic connectivity from spatio-temporal spike patterns.
Frontiers Comput. Neurosci. 2011 5:3

Townsend BR, Subasi E, Scherberger H
Grasp movement decoding from premotor and parietal cortex.
Journal of Neuroscience 2011 31(40): p. 14386-98

Wei W, Wolf F
Spike onset dynamics and response speed in neuronal populations.
Physical Review Letters 2011 106(8), 088102

Yu D, Parlitz U
Inferring Network Connectivity by Delayed Feedback Control.
PLoS ONE 2011 6(9):e24333. doi: 10.1371/journal.pone.0024333

2010

Buran B, Strenzke N, Neef A, Gundelfinder ED, Moser T, Liberman MC
Onset Coding Is Degraded in Auditory Nerve Fibers from Mutant Mice Lacking Synaptic Ribbonss.
Journal of Neuroscience 2010 30(22):7587–7597

Junek S, Kludt E, Wolf F, Schild D
Olfactory coding with patterns of response latencies.
Neuron 2010 67(5):872-884

Westendorff S, Klaes C, Gail A
The cortical timeline for deciding on reach motor goals.
Journal of Neuroscience 2010 30(15):5426-36.

Yu D, Parlitz U
Inferring local dynamics and connectivity of spatially extended systems with long-range links based on steady-state stabilization.
Phys Rev. 2010 E 82, 02610